Spa typing of Staphylococcus aureus | TracePatho

金黄色葡萄球菌spa型预测

*Genome sequence in FASTA format:

Load Example

拖放文件到此处或点击上传

文件必须是FASTA格式, 后缀名为.fna, .fa, .fasta.

Upload DNA sequence file(s) in FASTA format to start the analysis

*alignment_tool:

*evalue:

应用信息

使用spaTyper软件，基于金黄色葡萄球菌的基因组序列预测spa型别

Running time: <3min
Sample input: Staphylococcus_aureus_spa.fna
Example output: SAMPLE result

参考文献

如果您在研究中使用了本工具，请在文章中引用下列文章:

TracePatho. 2025. TracePatho: All-in-one microbial analysis platform. Accessed July 9, 2025. https://tracepatho.com/.

Bartels MD, Petersen A, Worning P, et al. Comparing whole-genome sequencing with Sanger sequencing for spa typing of methicillin-resistant Staphylococcus aureus. J Clin Microbiol. 2014;52(12):4305-4308. doi:10.1128/JCM.01979-14

Harmsen D, Claus H, Witte W, et al. Typing of methicillin-resistant Staphylococcus aureus in a university hospital setting by using novel software for spa repeat determination and database management. J Clin Microbiol. 2003;41(12):5442-5448. doi:10.1128/JCM.41.12.5442-5448.2003