Multilocus sequence typing (MLST)
- Analysis
- 52d0e67fb637
- 2025-06-19 08:48:27
This table shows the results for all samples analyzed.
| Filename | Alleles | Sequence Type | Scheme |
|---|
- Filename: Strain name
- Alleles: Identifier(s) of the housekeeping gene allele(s) used in MLST, along with their matched sequence type assignments
- Sequence Type: Unique numerical designation assigned to a strain based on its specific allelic profile
- Scheme: Name and version of the MLST nomenclature system applied
If you use this tool in your research, please cite following reference:
TracePatho. 2025. TracePatho: All-in-one microbial analysis platform. Accessed July 9, 2025. https://tracepatho.com/.
Maiden MC et al. 1998. Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms. Proc Natl Acad Sci USA, 95:3140-3145.
Urwin R & Maiden MC 2003. Multi-locus sequence typing: a tool for global epidemiology. Trends Microbiol, 11:479-487.
Maiden MC 2006, Multilocus Sequence Typing of Bacteria. Annu Rev Microbiol 60:561-588.
Maiden MC et al. 2013. MLST revisited: the gene-by-gene approach to bacterial genomics. Nat Rev Microbiol 11:728-736.
Jolley KA, Bray JE & Maiden MC 2018. Open-access bacterial population genomics: BIGSdb software, the PubMLST.org website and their applications. Wellcome Open Res 3:124