SARS-CoV-2 Lineage Designation | TracePatho - 病原微生物溯源平台

新冠谱系划分

*Genome sequence in FASTA format:

Load Example

拖放文件到此处或点击上传

文件必须是FASTA格式, 后缀名为.fna, .fa, .fasta.

Upload DNA sequence file(s) in FASTA format to start the analysis

*Minimum query length allowed for pangolin to attempt assignment:

*Maximum proportion of Ns allowed for pangolin to attempt assignment:

应用信息

使用Pangolin软件对SARS-CoV-2谱系进行命名

Running time: <3min
Sample input: SARS-CoV-2.fa
Example output: SAMPLE result

参考文献

如果您在研究中使用了本工具，请在文章中引用下列文章:

TracePatho. 2025. TracePatho: All-in-one microbial analysis platform. Accessed July 9, 2025. https://tracepatho.com/.

Rambaut A, Holmes EC, O'Toole Á, et al. A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology. Nat Microbiol. 2020;5(11):1403-1407. doi:10.1038/s41564-020-0770-5

O'Toole Á, Scher E, Underwood A, et al. Assignment of epidemiological lineages in an emerging pandemic using the pangolin tool. Virus Evol. 2021;7(2):veab064. Published 2021 Jul 30. doi:10.1093/ve/veab064