Type III Secretion System Prediction
- Analysis
- 0c50fb3cfae9
- 2025-06-27 15:06:39
Number of putative secreted proteins: x
- Protein: Query sequence ID;
- Is secreted: Effector classification (true/false) according to the applied threshold;
If you use this tool in your research, please cite following reference:
TracePatho. 2025. TracePatho: All-in-one microbial analysis platform. Accessed July 9, 2025. https://tracepatho.com/.
Eichinger V, Nussbaumer T, Platzer A, Jehl MA, Arnold R, Rattei T. EffectiveDB--updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems. Nucleic Acids Res. 2016;44(D1):D669-D674. doi:10.1093/nar/gkv1269
Arnold R, Brandmaier S, Kleine F, et al. Sequence-based prediction of type III secreted proteins [published correction appears in PLoS Pathog. 2009 Apr;5(4). doi: 10.1371/annotation/78659a32-7869-4b14-91a6-b301a588d937]. PLoS Pathog. 2009;5(4):e1000376. doi:10.1371/journal.ppat.1000376