Type VI Secretion System Prediction
- Analysis
- d38901659de0
- 2025-06-27 15:07:21
Results
Summary of the T6SS gene clusters:
Identified T6SS gene cluster(s): predicted component proteins
| ID | Coordinates | Genes |
|---|
Note: Typically, the bacterial T6SS is composed of about 13 core components [Boyer et al. (2009) BMC Genomics].
Protein based results
| Coordinates | Strand | Length | PID | Locus_tag | Product | T6CP_ID | Identities (%) | E-value | Bit_score | Description |
|---|
Tips:
- Coordinates: The start and end coordinates of the gene；
- Strand: The strand on which the gene is located, either positive (+) or negative (-)；
- Length (bp): The length of the gene in base pairs (bp)；
- PID: Query protein ID；
- Locus_tag: The specific name or tag for the gene；
- Product: The product or functional description of the gene；
- T6CP_ID: The unique identifier for the best hit protein in the database；
- Identities (%): The percentage of identical amino acids；
- E-value: The statistical significance of the match；
- Bit_score: A measure of the quality of the match；
- Description: A brief annotation of the component；
Reference
If you use this tool in your research, please cite following reference:
TracePatho. 2025. TracePatho: All-in-one microbial analysis platform. Accessed July 9, 2025. https://tracepatho.com/.
Zhang J, Guan J, Wang M, et al. SecReT6 update: a comprehensive resource of bacterial Type VI Secretion Systems. Sci China Life Sci. 2023;66(3):626-634. doi:10.1007/s11427-022-2172-x