Salmonella Pathogenicity Island (SPI) finder
- Analysis
- 0d527446b476
- 2025-06-27 16:50:06
Tips:
- SPI: SPI number;
- Position_in_ref: The length of the SPI in the reference genome sequence;
- Identity (%): The percentage of identical amino acids;
- Organism: Organism name;
- Accession: Accession number
Reference
If you use this tool in your research, please cite following reference:
TracePatho. 2025. TracePatho: All-in-one microbial analysis platform. Accessed July 9, 2025. https://tracepatho.com/.
Roer L, Hendriksen RS, Leekitcharoenphon P, et al. Is the Evolution of Salmonella enterica subsp. enterica Linked to Restriction-Modification Systems?. mSystems. 2016;1(3):e00009-16. Published 2016 Jun 21. doi:10.1128/mSystems.00009-16
Li Lingzhi, Gu Dan, Jiao Xin'an, Pan Zhiming. Role of pathogenicity islands in Salmonella during persistent infection. Microbiology China. 2022, 49(10): 4327-4336. doi:10.13344/j.microbiol.china.220410