基本信息

Based on the Pathogen-Host Interactions Database (PHI-base), pathogenic genes, virulence genes, effector protein genes, and other relevant genes in pathogens were annotated and predicted.

更多详情

PHI-base aggregates experimentally validated or literature-reported pathogenicity genes, virulence genes, and effector protein genes of fungal, oomycete, bacterial, and other pathogen species that can infect plants, animals, fungi, and insects. This database plays a crucial role in research aimed at identifying target genes for drug intervention. Additionally, PHI-base includes antifungal compounds and their corresponding target genes, along with detailed descriptions of the predicted protein functions during the process of host infection.

最新动态

NA

补充信息

Related links:

http://www.phi-base.org/

参考文献

Buchfink B, Reuter K, Drost HG. Sensitive protein alignments at tree-of-life scale using DIAMOND. Nat Methods. 2021;18(4):366-368. doi:10.1038/s41592-021-01101-x

Urban M, Cuzick A, Seager J, et al. PHI-base in 2022: a multi-species phenotype database for Pathogen-Host Interactions. Nucleic Acids Res. 2022;50(D1):D837-D847. doi:10.1093/nar/gkab1037