Salmonella Pathogenicity Island (SPI) finder | TracePatho

沙门氏菌致病岛鉴定

*Genome sequence in FASTA format:

Load Example

拖放文件到此处或点击上传

文件必须是FASTA格式, 后缀名为.fna, .fa, .fasta.

Upload DNA sequence file(s) in FASTA format to start the analysis

*alignment_tool:

*identity threshold:

*cover threshold:

应用信息

用于识别和定位沙门氏菌中致病岛（Pathogenicity Islands）的工具

Running time: <3min
Sample input: Salmonella.fa
Example output: SAMPLE result

参考文献

如果您在研究中使用了本工具，请在文章中引用下列文章:

TracePatho. 2025. TracePatho: All-in-one microbial analysis platform. Accessed July 9, 2025. https://tracepatho.com/.

Roer L, Hendriksen RS, Leekitcharoenphon P, et al. Is the Evolution of Salmonella enterica subsp. enterica Linked to Restriction-Modification Systems?. mSystems. 2016;1(3):e00009-16. Published 2016 Jun 21. doi:10.1128/mSystems.00009-16

Li Lingzhi, Gu Dan, Jiao Xin'an, Pan Zhiming. Role of pathogenicity islands in Salmonella during persistent infection. Microbiology China. 2022, 49(10): 4327-4336. doi:10.13344/j.microbiol.china.220410